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Saccharomyces cerevisiae

Cyclebase periodic rank: 4,473



Gene Features:

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Degradation Signals:
  1. Dbox

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 1.179
P(reg)
= 1.411
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info NUDT17 [AT2G01670] Arabidopsis thaliana 440 uncertain 0.018 0.059
Click to View Chart Preview Click for Info aps1 [SPAC13G6.14] Schizosaccharomyces pombe 2,759 uncertain 5.17E-4 2.423
Click to View Chart Preview Click for Info NUDT12 [AT1G12880] Arabidopsis thaliana 6,181 uncertain 2.851 3.54E-4
Click to View Chart Preview Click for Info NUDT13 [AT3G26690] Arabidopsis thaliana 6,854 uncertain 1.867 0.012
Click to View Chart Preview Click for Info GUCA1B [ENSG00000112599] Homo sapiens 11,468 uncertain 1.462 0.77
Click to View Chart Preview Click for Info ASB6 [ENSG00000148331] Homo sapiens 11,469 uncertain 1.462 0.77
Click to View Chart Preview Click for Info IMAGE:418198 [ENSG00000176315] Homo sapiens 11,470 uncertain 1.462 0.77
Click to View Chart Preview Click for Info IMAGE:418198 [ENSG00000205857] Homo sapiens 11,471 uncertain 1.462 0.77
Click to View Chart Preview Click for Info NUDT10 [ENSG00000122824] Homo sapiens 11,604 uncertain 1.298 0.942
Click to View Chart Preview Click for Info NUDT3 [ENSG00000112664] Homo sapiens 14,064 uncertain 3.511 7.276
Click to View Chart Preview Click for Info NUDT21 [AT1G73540] Arabidopsis thaliana 16,251 uncertain 2.471 0.723
Click to View Chart Preview Click for Info NUDT16 [AT3G12600] Arabidopsis thaliana 17,178 uncertain 1.142 2.375

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of DDP1 (from probeset YOR163W).

Click to enlarge