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Saccharomyces cerevisiae

Cyclebase periodic rank: 2,110



Gene Features:

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Degradation Signals:
  1. PEST

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 0.003
P(reg)
= 0.3199
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info sts5 [SPCC16C4.09] Schizosaccharomyces pombe 445 G2 6.12E-11 3.3E-6
Periodic
Click to View Chart Preview Click for Info dis3 [SPBC26H8.10] Schizosaccharomyces pombe 1,410 uncertain 3.85E-8 0.149
Click to View Chart Preview Click for Info SPAC2C4.07c Schizosaccharomyces pombe 2,544 uncertain 0.917 8.74E-4
Click to View Chart Preview Click for Info DSS1 [YMR287C] Saccharomyces cerevisiae 2,563 uncertain 0.542 0.01
Click to View Chart Preview Click for Info rpm1 [SPCC23B6.06] Schizosaccharomyces pombe 2,629 uncertain 0.232 0.115
Click to View Chart Preview Click for Info SSD1 [YDR293C] Saccharomyces cerevisiae 3,984 uncertain 62.96 0.007
Click to View Chart Preview Click for Info ssd1 [SPBC609.01] Schizosaccharomyces pombe 4,424 uncertain 3539.689 0.004
Click to View Chart Preview Click for Info T1E22_10 [AT5G02250] Arabidopsis thaliana 4,707 uncertain 0.084 1.324
Click to View Chart Preview Click for Info PRIC285 [ENSG00000130589] Homo sapiens 8,199 uncertain 0.221 0.674
Click to View Chart Preview Click for Info At2g17510 Arabidopsis thaliana 11,040 uncertain 0.269 2.28
Click to View Chart Preview Click for Info DIS3L2 [ENSG00000144535] Homo sapiens 12,024 uncertain 1.201 1.327
Click to View Chart Preview Click for Info DIS3L [ENSG00000166938] Homo sapiens 13,180 uncertain 1.959 2.17
Click to View Chart Preview Click for Info T32E8.1 [AT1G77680] Arabidopsis thaliana 17,290 uncertain 1.223 2.256

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of DIS3 (from probeset YOL021C).

Click to enlarge