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Saccharomyces cerevisiae

Cyclebase periodic rank: 4,931



Gene Features:

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Degradation Signals:
  1. PEST

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 4.506
P(reg)
= 1.316
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info pst2 [SPAC23C11.15] Schizosaccharomyces pombe 553 uncertain 5.93E-13 0.003
Click to View Chart Preview Click for Info F23H11.20 [AT1G59890] Arabidopsis thaliana 2,181 uncertain 0.012 2.538
Click to View Chart Preview Click for Info pst1 [SPBC12C2.10c] Schizosaccharomyces pombe 2,292 uncertain 0.008 0.152
Click to View Chart Preview Click for Info pst3 [SPBC1734.16c] Schizosaccharomyces pombe 2,428 uncertain 5.37E-6 2.991
Click to View Chart Preview Click for Info AT3g28870 Arabidopsis thaliana 3,592 uncertain 1.053 8.37E-4
Click to View Chart Preview Click for Info F3I6.14 [AT1G24210] Arabidopsis thaliana 5,661 uncertain 1.669 0.004
Click to View Chart Preview Click for Info AT1g27220 Arabidopsis thaliana 7,531 uncertain 3 0.002
Click to View Chart Preview Click for Info SIN3A [ENSG00000169375] Homo sapiens 9,861 uncertain 1.615 0.247
Click to View Chart Preview Click for Info WRKY19 [AT4G12020] Arabidopsis thaliana 13,416 uncertain 0.681 1.546
Click to View Chart Preview Click for Info At3g24260 Arabidopsis thaliana 13,440 uncertain 2.539 0.31
Click to View Chart Preview Click for Info F2G14_140 [AT5G15020] Arabidopsis thaliana 13,778 uncertain 0.712 1.646
Click to View Chart Preview Click for Info At1g10250 Arabidopsis thaliana 18,324 uncertain 1.666 2.059
Click to View Chart Preview Click for Info T22N4.5 [AT3G01320] Arabidopsis thaliana 19,235 uncertain 1.752 2.445
Click to View Chart Preview Click for Info At1g27240 Arabidopsis thaliana 19,852 uncertain 2.82 1.663
Click to View Chart Preview Click for Info SIN3 [AT1G24190] Arabidopsis thaliana 20,096 uncertain 2.477 2.095
Click to View Chart Preview Click for Info F20P5.21 [AT1G70060] Arabidopsis thaliana 20,598 uncertain 3.053 2.004

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of SIN3 (from probeset YOL004W).

Click to enlarge