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Saccharomyces cerevisiae

Cyclebase periodic rank: 2,677



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 0.0769
P(reg)
= 0.101
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info RPL22L1 [ENSG00000163584] Homo sapiens 3,444 uncertain 0.001 2.793
Click to View Chart Preview Click for Info RPL22B [YFL034C-A] Saccharomyces cerevisiae 4,080 uncertain 1.961 0.276
Click to View Chart Preview Click for Info rpl22 [SPAC11E3.15] Schizosaccharomyces pombe 4,841 uncertain 140061.837 0.08
Click to View Chart Preview Click for Info RPL22A [AT1G02830] Arabidopsis thaliana 10,727 uncertain 1.13 0.361
Click to View Chart Preview Click for Info RPL22B [AT3G05560] Arabidopsis thaliana 11,102 uncertain 0.675 0.769
Click to View Chart Preview Click for Info RPL22 [ENSG00000116251] Homo sapiens 13,227 uncertain 5.967 0.756
Click to View Chart Preview Click for Info RPL22C [AT5G27770] Arabidopsis thaliana 16,537 uncertain 2.149 0.931

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of RPL22A (from probeset YLR061W).

Click to enlarge