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Saccharomyces cerevisiae

Cyclebase periodic rank: 4,777



Gene Features:

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Degradation Signals:
  1. KENbox
  2. PEST

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 364.4
P(reg)
= 0.0108
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
* Y-axis rescaled to remove outlier(s)
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info GLG2 [YJL137C] Saccharomyces cerevisiae 270 G2 3.88E-14 5.96E-4
Periodic
Click to View Chart Preview Click for Info SPAC5H10.12c Schizosaccharomyces pombe 422 G1 7.86E-15 0.002
Periodic
Click to View Chart Preview Click for Info AT1g08990 Arabidopsis thaliana 913 uncertain 0.111 0.002
Click to View Chart Preview Click for Info GNT1 [YOR320C] Saccharomyces cerevisiae 1,224 uncertain 9.66E-9 1.444
Click to View Chart Preview Click for Info PGSIP1 [AT3G18660] Arabidopsis thaliana 3,006 uncertain 0.963 2.47E-4
Click to View Chart Preview Click for Info mug136 [SPBC4C3.08] Schizosaccharomyces pombe 3,395 uncertain 6.887 0.036
Click to View Chart Preview Click for Info AtGolS1 [AT2G47180] Arabidopsis thaliana 3,504 uncertain 0.988 9.6E-4
Click to View Chart Preview Click for Info SPBC4C3.09 Schizosaccharomyces pombe 3,600 uncertain 6.11 0.643
Click to View Chart Preview Click for Info GYG1 [ENSG00000163754] Homo sapiens 3,881 uncertain 0.001 4.713
Click to View Chart Preview Click for Info GYG2P [ENSG00000206159] Homo sapiens 7,154 uncertain 0.26 0.29
Click to View Chart Preview Click for Info T14N5.1 [AT1G77130] Arabidopsis thaliana 9,125 uncertain 0.158 2.439
Click to View Chart Preview Click for Info T13D8.32 [AT1G60450] Arabidopsis thaliana 11,179 uncertain 2.858 0.11
Click to View Chart Preview Click for Info At2g35710 Arabidopsis thaliana 12,107 uncertain 2.04 0.267
Click to View Chart Preview Click for Info F17M5.90 [AT4G33330] Arabidopsis thaliana 12,691 uncertain 1.183 0.64
Click to View Chart Preview Click for Info GYG2 [ENSG00000056998] Homo sapiens 13,259 uncertain 8.998 0.521
Click to View Chart Preview Click for Info At5g30500 Arabidopsis thaliana 15,729 uncertain 1.09 1.716
Click to View Chart Preview Click for Info AtGolS3 [AT1G09350] Arabidopsis thaliana 17,331 uncertain 2.136 1.165
Click to View Chart Preview Click for Info dl4325w [AT4G16600] Arabidopsis thaliana 18,965 uncertain 2.827 1.28
Click to View Chart Preview Click for Info AtGolS2 [AT1G56600] Arabidopsis thaliana 19,275 uncertain 2.554 1.572
Click to View Chart Preview Click for Info F14C21.47 [AT1G54940] Arabidopsis thaliana 19,351 uncertain 2.935 1.356
Click to View Chart Preview Click for Info At1g60470 Arabidopsis thaliana 20,079 uncertain 2.675 1.899

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of GLG1 (from probeset YKR058W).

Click to enlarge