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Saccharomyces cerevisiae

Cyclebase periodic rank: 4,816



Gene Features:

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Degradation Signals:
  1. PEST

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 11.71
P(reg)
= 0.372
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info ypt5 [SPAC6F6.15] Schizosaccharomyces pombe 625 uncertain 2.06E-17 0.269
Click to View Chart Preview Click for Info RABL [ENSG00000108774] Homo sapiens 3,266 uncertain 0.002 1.913
Click to View Chart Preview Click for Info YPT53 [YNL093W] Saccharomyces cerevisiae 4,447 uncertain 16.83 0.091
Click to View Chart Preview Click for Info RAB31 [ENSG00000168461] Homo sapiens 4,726 uncertain 0.004 3.703
Click to View Chart Preview Click for Info VPS21 [YOR089C] Saccharomyces cerevisiae 5,142 uncertain 13.87 0.82
Click to View Chart Preview Click for Info YPT10 [YBR264C] Saccharomyces cerevisiae 5,365 uncertain 60.91 0.356
Click to View Chart Preview Click for Info RAB17 [ENSG00000124839] Homo sapiens 6,811 uncertain 0.034 1.796
Click to View Chart Preview Click for Info RAB5B [ENSG00000111540] Homo sapiens 7,932 uncertain 0.018 6.889
Click to View Chart Preview Click for Info RHA1 [AT5G45130] Arabidopsis thaliana 9,915 uncertain 0.195 2.372
Click to View Chart Preview Click for Info ARA6 [AT3G54840] Arabidopsis thaliana 12,458 uncertain 0.353 2.569
Click to View Chart Preview Click for Info F24J7.190 [AT4G19640] Arabidopsis thaliana 13,958 uncertain 0.545 2.393

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of YPT52 (from probeset YKR014C).

Click to enlarge