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Saccharomyces cerevisiae

Cyclebase periodic rank: 510

Periodic


Gene Features:

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Degradation Signals:
  1. PEST
Phosphorylated By:
  1. Cdc28p

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 2.304E-15
P(reg)
= 0.4242
Peaktime
= M (90%)

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info SPBC839.02 Schizosaccharomyces pombe 143 G1 1.09E-24 2.48E-7
Periodic
Click to View Chart Preview Click for Info SPCC584.15c Schizosaccharomyces pombe 219 M 7.05E-24 0.004
Periodic
Click to View Chart Preview Click for Info SPBC2D10.04 Schizosaccharomyces pombe 251 M 1.38E-20 0.001
Periodic
Click to View Chart Preview Click for Info SPAC31A2.12 Schizosaccharomyces pombe 452 G2 3.39E-14 0.002
Periodic
Click to View Chart Preview Click for Info ROD1 [YOR018W] Saccharomyces cerevisiae 536 M 3.04E-16 1.209
Periodic
Click to View Chart Preview Click for Info ECM21 [YBL101C] Saccharomyces cerevisiae 949 uncertain 7.21E-9 0.285
Click to View Chart Preview Click for Info TXNIP [ENSG00000117289] Homo sapiens 1,047 uncertain 2.377 9.13E-6
Click to View Chart Preview Click for Info ALY1 [YKR021W] Saccharomyces cerevisiae 1,297 uncertain 2.29E-6 0.336
Click to View Chart Preview Click for Info ROG3 [YFR022W] Saccharomyces cerevisiae 1,401 uncertain 6.85E-4 0.069
Click to View Chart Preview Click for Info ARRDC1 [ENSG00000197070] Homo sapiens 2,688 uncertain 0.003 0.564
Click to View Chart Preview Click for Info ART5 [YGR068C] Saccharomyces cerevisiae 3,008 uncertain 0.036 0.712
Click to View Chart Preview Click for Info CSR2 [YPR030W] Saccharomyces cerevisiae 3,374 uncertain 1.813 0.042
Click to View Chart Preview Click for Info ARRDC5 [ENSG00000205784] Homo sapiens 13,399 uncertain 2.623 2.071

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of ALY2 (from probeset YJL084C).

Click to enlarge