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Saccharomyces cerevisiae

Cyclebase periodic rank: 167

Periodic


Gene Features:

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Degradation Signals:
  1. Dbox
  2. PEST
Phosphorylated By:
  1. Cdc28p

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 8.316E-15
P(reg)
= 7.583E-7
Peaktime
= G1 (10%)

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info YRF1-5 [YLR467W] Saccharomyces cerevisiae 159 G1 1.71E-14 1.79E-7
Periodic
Click to View Chart Preview Click for Info YRF1-2 [YER190W] Saccharomyces cerevisiae 168 G1 6.72E-14 9.64E-8
Periodic
Click to View Chart Preview Click for Info YLL066C Saccharomyces cerevisiae 175 G1 2.83E-14 5.63E-7
Periodic
Click to View Chart Preview Click for Info YRF1-7 [YPL283C] Saccharomyces cerevisiae 178 G1 9.65E-15 1.78E-6
Periodic
Click to View Chart Preview Click for Info YRF1-6 [YNL339C] Saccharomyces cerevisiae 198 G1 1.28E-12 8.56E-8
Periodic
Click to View Chart Preview Click for Info YJL225C Saccharomyces cerevisiae 199 G1 1.4E-13 1.13E-6
Periodic
Click to View Chart Preview Click for Info YIL177C Saccharomyces cerevisiae 216 G1 2.6E-14 2.03E-5
Periodic
Click to View Chart Preview Click for Info YRF1-4 [YLR466W] Saccharomyces cerevisiae 222 G1 5.8E-13 1.22E-6
Periodic
Click to View Chart Preview Click for Info YEL077C Saccharomyces cerevisiae 266 G1 4.27E-12 4.86E-6
Periodic
Click to View Chart Preview Click for Info YLL067C Saccharomyces cerevisiae 326 G1 9.67E-10 1.11E-6
Periodic
Click to View Chart Preview Click for Info YML133C Saccharomyces cerevisiae 356 G1 6.86E-11 1.62E-4
Periodic
Click to View Chart Preview Click for Info YRF1-1 [YDR545W] Saccharomyces cerevisiae 363 G1 3.02E-9 8.51E-6
Periodic
Click to View Chart Preview Click for Info YPR204W Saccharomyces cerevisiae 424 G1 9.09E-9 1.63E-4
Periodic

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of YRF1-3 (from probeset YGR296W).

Click to enlarge