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Saccharomyces cerevisiae

Cyclebase periodic rank: 679



Gene Features:

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Degradation Signals:
  1. Dbox

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 2.693E-4
P(reg)
= 4.114E-4
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info AT3g20440 Arabidopsis thaliana 848 uncertain 0.001 1.534
Click to View Chart Preview Click for Info sbe2-2 [AT5G03650] Arabidopsis thaliana 1,190 uncertain 0.167 0.001
Click to View Chart Preview Click for Info At5g04360 Arabidopsis thaliana 3,090 uncertain 0.638 0.004
Click to View Chart Preview Click for Info At1g03310 Arabidopsis thaliana 6,372 uncertain 1.037 0.079
Click to View Chart Preview Click for Info GBE1 [ENSG00000114480] Homo sapiens 10,308 uncertain 0.118 4.45
Click to View Chart Preview Click for Info At4g09020 Arabidopsis thaliana 11,735 uncertain 0.406 1.74
Click to View Chart Preview Click for Info At2g39930 Arabidopsis thaliana 16,801 uncertain 1.08 2.277
Click to View Chart Preview Click for Info sbe2-1 [AT2G36390] Arabidopsis thaliana 18,552 uncertain 1.997 1.752

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of GLC3 (from probeset YEL011W).

Click to enlarge