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Saccharomyces cerevisiae

Cyclebase periodic rank: 3,280



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 26.42
P(reg)
= 0.002
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info idp1 [SPAC6G10.08] Schizosaccharomyces pombe 1,673 uncertain 1.85E-6 0.163
Click to View Chart Preview Click for Info IDP2 [YLR174W] Saccharomyces cerevisiae 2,056 uncertain 0.006 0.145
Click to View Chart Preview Click for Info IDH1 [ENSG00000138413] Homo sapiens 2,262 uncertain 0.264 0.003
Click to View Chart Preview Click for Info IDP3 [YNL009W] Saccharomyces cerevisiae 4,145 uncertain 35.83 0.018
Click to View Chart Preview Click for Info IDH2 [ENSG00000182054] Homo sapiens 5,857 uncertain 0.01 3.379
Click to View Chart Preview Click for Info IDH [AT1G65930] Arabidopsis thaliana 9,672 uncertain 0.18 2.443
Click to View Chart Preview Click for Info ICDH [AT1G54340] Arabidopsis thaliana 10,577 uncertain 0.362 1.389
Click to View Chart Preview Click for Info T15N1_80 [AT5G14590] Arabidopsis thaliana 15,825 uncertain 0.854 2.356

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of IDP1 (from probeset YDL066W).

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