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Saccharomyces cerevisiae

Cyclebase periodic rank: 3,981



Gene Features:

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Overexpression Phenotype:
  1. Cell Cycle Arrest

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 11.97
P(reg)
= 0.0351
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info anc1 [SPBC530.10c] Schizosaccharomyces pombe 1,995 uncertain 5.52E-7 1.118
Click to View Chart Preview Click for Info PET9 [YBL030C] Saccharomyces cerevisiae 2,011 uncertain 0.399 0.002
Click to View Chart Preview Click for Info AAC1 [YMR056C] Saccharomyces cerevisiae 2,272 uncertain 0.01 0.176
Click to View Chart Preview Click for Info SLC25A31 [ENSG00000151475] Homo sapiens 3,023 uncertain 1.308 0.002
Click to View Chart Preview Click for Info ANT2 [AT5G13490] Arabidopsis thaliana 5,428 uncertain 0.347 0.306
Click to View Chart Preview Click for Info At5g56450 Arabidopsis thaliana 9,296 uncertain 0.158 2.551
Click to View Chart Preview Click for Info SLC25A4 [ENSG00000151729] Homo sapiens 13,863 uncertain 1.53 6.886
Click to View Chart Preview Click for Info SLC25A5 [ENSG00000005022] Homo sapiens 14,020 uncertain 1.837 9.721
Click to View Chart Preview Click for Info ANT1 [AT3G08580] Arabidopsis thaliana 15,702 uncertain 1.087 1.708
Click to View Chart Preview Click for Info At5g17400 Arabidopsis thaliana 18,522 uncertain 2.099 1.638
Click to View Chart Preview Click for Info AT4g28390 Arabidopsis thaliana 18,549 uncertain 1.483 2.504

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of AAC3 (from probeset YBR085W).

Click to enlarge