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[Viewing data for 'Rustici-cdc25-2' only. See combined data for not2]

Schizosaccharomyces pombe

Cyclebase periodic rank: 4,726



Analysis Results

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Analysis Results of 'Rustici-cdc25-2'

P(per)
= 0.6649
P(reg)
= 1.2713
Peaktime
uncertain [see possible reasons why]

Peaktime

Peaktime Chart
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Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info At1g07700 Arabidopsis thaliana 4,700 uncertain 0.063 1.84
Click to View Chart Preview Click for Info CDC36 [YDL165W] Saccharomyces cerevisiae 4,909 uncertain 9.002 0.629
Click to View Chart Preview Click for Info NOT2 [ENSG00000111596] Homo sapiens 13,516 uncertain 2.811 2.192
Click to View Chart Preview Click for Info VIP2 [AT5G59710] Arabidopsis thaliana 13,854 uncertain 0.505 2.557
Click to View Chart Preview Click for Info At1g07705 Arabidopsis thaliana 14,656 uncertain 0.824 1.777

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

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Graph of not2 (from probeset SPCC4G3.15c).

Click to enlarge