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Schizosaccharomyces pombe

Cyclebase periodic rank: 487

Periodic


Analysis Results

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Combined Analysis (all experiments)

P(per)
= 2.848E-8
P(reg)
= 3.384E-8
Peaktime
= G2 (34%)

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info SPAC9.04 Schizosaccharomyces pombe 258 G2 1.02E-10 1.4E-12
Periodic
Click to View Chart Preview Click for Info Tf2-4 [SPAC26A3.13c] Schizosaccharomyces pombe 404 S/G2 7.13E-9 3.5E-9
Periodic
Click to View Chart Preview Click for Info Tf2-11 [SPBC1289.17] Schizosaccharomyces pombe 474 S/G2 3.19E-7 1.78E-9
Periodic
Click to View Chart Preview Click for Info Tf2-6 [SPAC27E2.08] Schizosaccharomyces pombe 492 G2 1.16E-7 1.02E-8
Periodic
Click to View Chart Preview Click for Info TY3A-I [YIL082W] Saccharomyces cerevisiae 772 uncertain 0.015 3.92E-7
Click to View Chart Preview Click for Info TY1A-BR [YBR012W-A] Saccharomyces cerevisiae 1,001 uncertain 0.115 3.63E-7
Click to View Chart Preview Click for Info TY1A-A [YAR010C] Saccharomyces cerevisiae 1,255 uncertain 0.545 3.08E-7
Click to View Chart Preview Click for Info TY1A-JR2 [YJR028W] Saccharomyces cerevisiae 1,344 uncertain 1.5 4.45E-8
Click to View Chart Preview Click for Info YMR051C Saccharomyces cerevisiae 1,445 uncertain 0.519 4.53E-6
Click to View Chart Preview Click for Info YAR009C Saccharomyces cerevisiae 1,492 uncertain 1.977 1.41E-7
Click to View Chart Preview Click for Info TY1A-JR1 [YML040W] Saccharomyces cerevisiae 1,711 uncertain 2.301 1.11E-6
Click to View Chart Preview Click for Info TY1A-BL [YBL005W-A] Saccharomyces cerevisiae 1,796 uncertain 1.162 2.06E-5
Click to View Chart Preview Click for Info T28P6.8 [AT1G48720] Arabidopsis thaliana 1,814 uncertain 0.895 2.77E-6
Click to View Chart Preview Click for Info TY2A-C [YCL020W] Saccharomyces cerevisiae 1,817 uncertain 2.385 3.01E-6
Click to View Chart Preview Click for Info TY1B-ER1 [YER138C] Saccharomyces cerevisiae 1,879 uncertain 1.601 2.12E-5
Click to View Chart Preview Click for Info TY2A-B [YBL100W-A] Saccharomyces cerevisiae 1,905 uncertain 2.433 7.78E-6
Click to View Chart Preview Click for Info J1555 [YJR026W] Saccharomyces cerevisiae 1,907 uncertain 4.489 1.24E-6
Click to View Chart Preview Click for Info TY1A-MR1 [YMR046C] Saccharomyces cerevisiae 2,094 uncertain 2 1.09E-4
Click to View Chart Preview Click for Info TY1B-MR2 [YMR050C] Saccharomyces cerevisiae 2,130 uncertain 2.59 7.52E-5
Click to View Chart Preview Click for Info TY1B-BL [YBL005W-B] Saccharomyces cerevisiae 2,403 uncertain 5.112 1.97E-4
Click to View Chart Preview Click for Info TY1B-ER2 [YER160C] Saccharomyces cerevisiae 2,461 uncertain 14.17 1.76E-5
Click to View Chart Preview Click for Info TY2B-B [YBL100W-B] Saccharomyces cerevisiae 2,540 uncertain 34.47 2.8E-6
Click to View Chart Preview Click for Info TY1B-MR1 [YMR045C] Saccharomyces cerevisiae 2,549 uncertain 7.113 3.18E-4
Click to View Chart Preview Click for Info At2g13730 Arabidopsis thaliana 2,600 uncertain 0.78 1.98E-4
Click to View Chart Preview Click for Info TY3B-I [YIL082W-A] Saccharomyces cerevisiae 2,612 uncertain 8.257 3.67E-4
Click to View Chart Preview Click for Info TY1B-JR2 [YJR029W] Saccharomyces cerevisiae 2,619 uncertain 29.5 9.99E-6
Click to View Chart Preview Click for Info TY1B-ML2 [YML039W] Saccharomyces cerevisiae 2,657 uncertain 16.38 8.39E-5
Click to View Chart Preview Click for Info TY1B-JR1 [YJR027W] Saccharomyces cerevisiae 2,754 uncertain 17.14 2.08E-4
Click to View Chart Preview Click for Info TY2B-C [YCL019W] Saccharomyces cerevisiae 2,779 uncertain 32.71 3.95E-5
Click to View Chart Preview Click for Info TY1B-H [YHR214C-B] Saccharomyces cerevisiae 2,798 uncertain 17.11 3.23E-4
Click to View Chart Preview Click for Info TY1B-ML1 [YML045W] Saccharomyces cerevisiae 2,824 uncertain 28.17 1.05E-4
Click to View Chart Preview Click for Info AtMg00710 Arabidopsis thaliana 2,870 uncertain 0.489 0.008
Click to View Chart Preview Click for Info TY1B-BR [YBR012W-B] Saccharomyces cerevisiae 2,881 uncertain 24.22 2.9E-4
Click to View Chart Preview Click for Info TY4A-J [YJL114W] Saccharomyces cerevisiae 4,148 uncertain 26.48 0.025
Click to View Chart Preview Click for Info TY4B-J [YJL113W] Saccharomyces cerevisiae 4,337 uncertain 41.58 0.026
Click to View Chart Preview Click for Info AT1g36550 Arabidopsis thaliana 4,417 uncertain 1.142 0.004
Click to View Chart Preview Click for Info F26B15_50 [AT3G42250] Arabidopsis thaliana 5,611 uncertain 2.05 0.001
Click to View Chart Preview Click for Info F4M19_30 [AT3G42070] Arabidopsis thaliana 7,400 uncertain 0.121 2.04
Click to View Chart Preview Click for Info AT4g05616 Arabidopsis thaliana 8,289 uncertain 2.44 0.019
Click to View Chart Preview Click for Info SLC9A7 [ENSG00000065923] Homo sapiens 8,345 uncertain 0.697 0.235
Click to View Chart Preview Click for Info KRBA2 [ENSG00000184619] Homo sapiens 8,346 uncertain 0.697 0.235
Click to View Chart Preview Click for Info IMAGE:938231 [ENSG00000197462] Homo sapiens 8,347 uncertain 0.697 0.235
Click to View Chart Preview Click for Info ZH2C2 [ENSG00000145723] Homo sapiens 8,538 uncertain 0.167 1.089
Click to View Chart Preview Click for Info AT5g28130 Arabidopsis thaliana 9,061 uncertain 2.096 0.068
Click to View Chart Preview Click for Info At5g45230 Arabidopsis thaliana 9,337 uncertain 0.96 0.283
Click to View Chart Preview Click for Info At5g48050 Arabidopsis thaliana 9,448 uncertain 2.068 0.087
Click to View Chart Preview Click for Info AtMg00860 Arabidopsis thaliana 9,601 uncertain 2.882 0.036
Click to View Chart Preview Click for Info AT3g31330 Arabidopsis thaliana 10,937 uncertain 2.046 0.173
Click to View Chart Preview Click for Info F4M19_40 [AT3G42080] Arabidopsis thaliana 13,376 uncertain 1.294 0.703
Click to View Chart Preview Click for Info AT3g30240 Arabidopsis thaliana 13,909 uncertain 2.721 0.332
Click to View Chart Preview Click for Info AT3g32903 Arabidopsis thaliana 13,960 uncertain 0.991 1.165
Click to View Chart Preview Click for Info AtMg00300 Arabidopsis thaliana 14,020 uncertain 1.755 0.592
Click to View Chart Preview Click for Info AT4g07500 Arabidopsis thaliana 14,574 uncertain 2.737 0.401
Click to View Chart Preview Click for Info At1g34070 Arabidopsis thaliana 14,941 uncertain 0.768 2.104
Click to View Chart Preview Click for Info AT2g06095 Arabidopsis thaliana 16,301 uncertain 2.74 0.648
Click to View Chart Preview Click for Info AT2g10105 Arabidopsis thaliana 16,428 uncertain 2.111 0.923
Click to View Chart Preview Click for Info AtMg00820 Arabidopsis thaliana 16,909 uncertain 1.724 1.339
Click to View Chart Preview Click for Info AtMg00240 Arabidopsis thaliana 16,959 uncertain 1.207 2.088
Click to View Chart Preview Click for Info AT1g41860 Arabidopsis thaliana 17,459 uncertain 1.799 1.493
Click to View Chart Preview Click for Info AtMg00750 Arabidopsis thaliana 17,880 uncertain 2.115 1.379
Click to View Chart Preview Click for Info AtMg00010 Arabidopsis thaliana 18,069 uncertain 1.675 1.91
Click to View Chart Preview Click for Info PP2A7 [AT5G45090] Arabidopsis thaliana 19,527 uncertain 1.879 2.441
Click to View Chart Preview Click for Info AtMg00810 Arabidopsis thaliana 20,178 uncertain 2.276 2.394

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of Tf2-12 (from probeset SPCC1020.14).

Click to enlarge