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Schizosaccharomyces pombe

Cyclebase periodic rank: 921



Gene Features:

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Degradation Signals:
  1. PEST

Analysis Results

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Combined Analysis (all experiments)

P(per)
= 2.272E-7
P(reg)
= 0.0026
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info ucp8 [SPBC83.01] Schizosaccharomyces pombe 1,888 uncertain 0.031 0.006
Click to View Chart Preview Click for Info irs4 [SPAC1687.09] Schizosaccharomyces pombe 2,421 uncertain 1.31E-5 2.162
Click to View Chart Preview Click for Info TAX4 [YJL083W] Saccharomyces cerevisiae 2,985 uncertain 0.012 1.97
Click to View Chart Preview Click for Info end3 [SPBC11G11.02c] Schizosaccharomyces pombe 4,199 uncertain 110.322 1.617
Click to View Chart Preview Click for Info END3 [YNL084C] Saccharomyces cerevisiae 4,249 uncertain 0.551 1.591
Click to View Chart Preview Click for Info pan1 [SPAC25G10.09c] Schizosaccharomyces pombe 4,729 uncertain 6587.554 2.763
Click to View Chart Preview Click for Info IRS4 [YKR019C] Saccharomyces cerevisiae 5,394 uncertain 5.96 3.949
Click to View Chart Preview Click for Info EDE1 [YBL047C] Saccharomyces cerevisiae 5,450 uncertain 41.5 0.687
Click to View Chart Preview Click for Info PAN1 [YIR006C] Saccharomyces cerevisiae 5,875 uncertain 87.71 1.983
Click to View Chart Preview Click for Info EPS15L1 [ENSG00000127527] Homo sapiens 12,167 uncertain 0.814 2.156
Click to View Chart Preview Click for Info F8K7.4 [AT1G21630] Arabidopsis thaliana 18,659 uncertain 1.48 2.589
Click to View Chart Preview Click for Info At1g20760 Arabidopsis thaliana 19,581 uncertain 1.904 2.443

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of SPBC800.10c (from probeset SPBC800.10c).

Click to enlarge