Cyclebase.org

Search Type:
  • Gene Name
  • BLAST
Example searches:

 
[Viewing data for 'Oliva-eluA' only. See combined data for syj1]

Schizosaccharomyces pombe

Cyclebase periodic rank: 1,245



Analysis Results

[hide] [show]

Analysis Results of 'Oliva-eluA'

P(per)
= 0.795
P(reg)
= 0.547
Peaktime
uncertain [see possible reasons why]

Peaktime

Peaktime Chart
Loading Image
Error Loading Image!

Orthologs and Paralogs:

[hide] [show]
Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info syj2 [SPBC577.13] Schizosaccharomyces pombe 1,813 uncertain 1.91E-5 0.146
Click to View Chart Preview Click for Info INP52 [YNL106C] Saccharomyces cerevisiae 1,850 uncertain 0.001 0.243
Click to View Chart Preview Click for Info INP53 [YOR109W] Saccharomyces cerevisiae 2,402 uncertain 0.004 0.716
Click to View Chart Preview Click for Info INP51 [YIL002C] Saccharomyces cerevisiae 3,789 uncertain 0.096 2.444
Click to View Chart Preview Click for Info SYNJ1 [ENSG00000159082] Homo sapiens 8,970 uncertain 0.169 1.408

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of syj1 (from probeset SPBC2G2.02).

Click to enlarge