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Schizosaccharomyces pombe

Cyclebase periodic rank: 1,388



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 1.437E-10
P(reg)
= 0.8779
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info CDC2 [ENSG00000170312] Homo sapiens 17 G2 1.15E-15 8.92E-12
Periodic
Click to View Chart Preview Click for Info CDKB2-1 [AT1G76540] Arabidopsis thaliana 177 M/G1 0.005 0.011
Periodic
Click to View Chart Preview Click for Info CDKB1-2 [AT2G38620] Arabidopsis thaliana 339 G2 0.017 0.02
Periodic
Click to View Chart Preview Click for Info csk1 [SPAC1D4.06c] Schizosaccharomyces pombe 591 uncertain 2.9E-12 0.003
Click to View Chart Preview Click for Info CDKB2-2 [AT1G20930] Arabidopsis thaliana 631 uncertain 0.004 0.584
Click to View Chart Preview Click for Info CDK2 [ENSG00000123374] Homo sapiens 1,052 uncertain 1.66E-5 1.344
Click to View Chart Preview Click for Info CDK4 [ENSG00000135446] Homo sapiens 1,160 uncertain 1.89E-4 0.209
Click to View Chart Preview Click for Info PCTK3 [ENSG00000117266] Homo sapiens 1,752 uncertain 0.018 0.016
Click to View Chart Preview Click for Info PHO85 [YPL031C] Saccharomyces cerevisiae 3,275 uncertain 5.249 0.011
Click to View Chart Preview Click for Info CDC28 [YBR160W] Saccharomyces cerevisiae 3,812 uncertain 1.022 0.251
Click to View Chart Preview Click for Info PFTK1 [ENSG00000058091] Homo sapiens 4,609 uncertain 1.586 0.008
Click to View Chart Preview Click for Info CAK1 [YFL029C] Saccharomyces cerevisiae 4,755 uncertain 1.074 3.399
Click to View Chart Preview Click for Info pef1 [SPCC16C4.11] Schizosaccharomyces pombe 4,792 uncertain 40991.534 0.172
Click to View Chart Preview Click for Info At5g53450 Arabidopsis thaliana 5,946 uncertain 0.387 0.316
Click to View Chart Preview Click for Info CDK3 [ENSG00000108504] Homo sapiens 8,869 uncertain 2.164 0.103
Click to View Chart Preview Click for Info SNT7 [AT1G68830] Arabidopsis thaliana 13,096 uncertain 0.904 0.996
Click to View Chart Preview Click for Info T20L15_190 [AT5G01920] Arabidopsis thaliana 15,562 uncertain 1.533 1.091
Click to View Chart Preview Click for Info CDKA-1 [AT3G48750] Arabidopsis thaliana 18,828 uncertain 1.536 2.58
Click to View Chart Preview Click for Info CDKF-1 [AT4G28980] Arabidopsis thaliana 20,683 uncertain 2.793 2.324

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of cdc2 (from probeset SPBC11B10.09).

Click to enlarge