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Schizosaccharomyces pombe

Cyclebase periodic rank: 4,461



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 149807.7026
P(reg)
= 1.419E-7
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info sou1 [SPAC8E11.10] Schizosaccharomyces pombe 885 uncertain 1.75E-7 0.002
Click to View Chart Preview Click for Info At2g47130 Arabidopsis thaliana 901 uncertain 0.022 0.263
Click to View Chart Preview Click for Info At2g47220 Arabidopsis thaliana 1,491 uncertain 0.031 0.446
Click to View Chart Preview Click for Info At2g29360 Arabidopsis thaliana 1,659 uncertain 0.241 0.003
Click to View Chart Preview Click for Info SPAC922.06 Schizosaccharomyces pombe 1,737 uncertain 0.015 0.005
Click to View Chart Preview Click for Info At2g29260 Arabidopsis thaliana 1,797 uncertain 0.115 0.11
Click to View Chart Preview Click for Info SPAC22A12.17c Schizosaccharomyces pombe 2,100 uncertain 0.118 0.001
Click to View Chart Preview Click for Info At2g30670 Arabidopsis thaliana 2,268 uncertain 0.017 1.923
Click to View Chart Preview Click for Info ENR1 [AT2G05990] Arabidopsis thaliana 2,734 uncertain 0.064 0.624
Click to View Chart Preview Click for Info oar2 [SPAC3G9.02] Schizosaccharomyces pombe 3,062 uncertain 1.384 0.089
Click to View Chart Preview Click for Info F28J7.36 [AT3G01980] Arabidopsis thaliana 3,114 uncertain 0.381 0.056
Click to View Chart Preview Click for Info ATA1 [AT3G42960] Arabidopsis thaliana 3,148 uncertain 0.585 0.008
Click to View Chart Preview Click for Info At3g04000 Arabidopsis thaliana 3,361 uncertain 0.728 0.004
Click to View Chart Preview Click for Info SPCC1739.08c Schizosaccharomyces pombe 4,164 uncertain 21164.311 1.31E-7
Click to View Chart Preview Click for Info At2g47150 Arabidopsis thaliana 4,512 uncertain 0.981 0.011
Click to View Chart Preview Click for Info At2g47120 Arabidopsis thaliana 4,678 uncertain 1.446 0.001
Click to View Chart Preview Click for Info SPS19 [YNL202W] Saccharomyces cerevisiae 4,983 uncertain 18.03 0.381
Click to View Chart Preview Click for Info OAR1 [YKL055C] Saccharomyces cerevisiae 5,026 uncertain 2.974 2.643
Click to View Chart Preview Click for Info HSDL2 [ENSG00000119471] Homo sapiens 5,331 uncertain 0.288 0.075
Click to View Chart Preview Click for Info AT4g13180 Arabidopsis thaliana 5,829 uncertain 1.526 0.008
Click to View Chart Preview Click for Info At3g12800 Arabidopsis thaliana 6,719 uncertain 0.111 1.861
Click to View Chart Preview Click for Info AtNYC1 [AT4G13250] Arabidopsis thaliana 6,875 uncertain 1.096 0.091
Click to View Chart Preview Click for Info At2g29350 Arabidopsis thaliana 6,984 uncertain 1.573 0.033
Click to View Chart Preview Click for Info AT3g29260 Arabidopsis thaliana 7,683 uncertain 1.028 0.147
Click to View Chart Preview Click for Info At3g51680 Arabidopsis thaliana 8,094 uncertain 0.211 1.294
Click to View Chart Preview Click for Info At2g17845 Arabidopsis thaliana 8,623 uncertain 2.622 0.019
Click to View Chart Preview Click for Info AtNOL1 [AT5G04900] Arabidopsis thaliana 9,010 uncertain 1.65 0.111
Click to View Chart Preview Click for Info At4g03140 Arabidopsis thaliana 9,493 uncertain 0.248 1.576
Click to View Chart Preview Click for Info DHRS1 [ENSG00000157379] Homo sapiens 9,500 uncertain 0.275 1.179
Click to View Chart Preview Click for Info At3g03980 Arabidopsis thaliana 9,711 uncertain 0.502 0.716
Click to View Chart Preview Click for Info At5g06060 Arabidopsis thaliana 10,384 uncertain 0.22 2.395
Click to View Chart Preview Click for Info At1g07440 Arabidopsis thaliana 10,507 uncertain 0.774 0.542
Click to View Chart Preview Click for Info At2g29150 Arabidopsis thaliana 10,710 uncertain 2.523 0.112
Click to View Chart Preview Click for Info At2g29290 Arabidopsis thaliana 11,443 uncertain 3.084 0.109
Click to View Chart Preview Click for Info At2g29370 Arabidopsis thaliana 11,649 uncertain 0.322 2.234
Click to View Chart Preview Click for Info At3g05260 Arabidopsis thaliana 12,440 uncertain 0.486 1.74
Click to View Chart Preview Click for Info At2g29330 Arabidopsis thaliana 12,741 uncertain 2.505 0.251
Click to View Chart Preview Click for Info ABA2 [AT1G52340] Arabidopsis thaliana 12,785 uncertain 0.505 1.841
Click to View Chart Preview Click for Info HSD17B14 [ENSG00000087076] Homo sapiens 13,330 uncertain 1.087 4.634
Click to View Chart Preview Click for Info AT5g18210 Arabidopsis thaliana 13,343 uncertain 0.644 1.618
Click to View Chart Preview Click for Info DECR2 [ENSG00000103202] Homo sapiens 13,391 uncertain 2.04 2.632
Click to View Chart Preview Click for Info DECR [ENSG00000104325] Homo sapiens 13,514 uncertain 2.806 2.185
Click to View Chart Preview Click for Info At1g07450 Arabidopsis thaliana 13,649 uncertain 0.861 1.251
Click to View Chart Preview Click for Info SCADH [AT4G05530] Arabidopsis thaliana 14,206 uncertain 0.697 1.914
Click to View Chart Preview Click for Info At1g54870 Arabidopsis thaliana 14,339 uncertain 1.214 1.019
Click to View Chart Preview Click for Info At3g26770 Arabidopsis thaliana 14,563 uncertain 2.585 0.429
Click to View Chart Preview Click for Info At2g29340 Arabidopsis thaliana 15,303 uncertain 2.115 0.687
Click to View Chart Preview Click for Info At2g47140 Arabidopsis thaliana 15,610 uncertain 2.288 0.678
Click to View Chart Preview Click for Info At3g29250 Arabidopsis thaliana 16,077 uncertain 1.907 0.952
Click to View Chart Preview Click for Info At1g10310 Arabidopsis thaliana 17,469 uncertain 1.146 2.575
Click to View Chart Preview Click for Info At2g29310 Arabidopsis thaliana 17,755 uncertain 1.551 1.93
Click to View Chart Preview Click for Info At3g26760 Arabidopsis thaliana 20,662 uncertain 3.09 2.043
Click to View Chart Preview Click for Info F12M12_140 [AT3G46170] Arabidopsis thaliana 20,865 uncertain 2.864 2.508

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of SPAC4H3.08 (from probeset SPAC4H3.08).

Click to enlarge