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[Viewing data for 'Oliva-cdc25' only. See combined data for phb1]

Schizosaccharomyces pombe

Cyclebase periodic rank: 2,752



Analysis Results

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Analysis Results of 'Oliva-cdc25'

P(per)
= 0.2663
P(reg)
= 1.1387
Peaktime
uncertain [see possible reasons why]

Peaktime

Peaktime Chart
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Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info At3g27280 Arabidopsis thaliana 1,953 uncertain 0.183 0.051
Click to View Chart Preview Click for Info PHB1 [YGR132C] Saccharomyces cerevisiae 5,650 uncertain 59.39 0.963
Click to View Chart Preview Click for Info F18O22_90 [AT5G14300] Arabidopsis thaliana 9,884 uncertain 2.718 0.056
Click to View Chart Preview Click for Info Atphb3 [AT5G40770] Arabidopsis thaliana 14,925 uncertain 2.864 0.423

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

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Graph of phb1 (from probeset SPAC1782.06c).

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