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Schizosaccharomyces pombe

Cyclebase periodic rank: 1,606



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 2.559E-6
P(reg)
= 0.105
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info NHX8 [AT1G14660] Arabidopsis thaliana 1,257 uncertain 0.019 0.567
Click to View Chart Preview Click for Info NHX1 [YDR456W] Saccharomyces cerevisiae 1,453 uncertain 3.57E-5 0.265
Click to View Chart Preview Click for Info SLC9A8 [ENSG00000197818] Homo sapiens 7,589 uncertain 0.049 2.064
Click to View Chart Preview Click for Info SLC9A7 [ENSG00000065923] Homo sapiens 8,345 uncertain 0.697 0.235
Click to View Chart Preview Click for Info KRBA2 [ENSG00000184619] Homo sapiens 8,346 uncertain 0.697 0.235
Click to View Chart Preview Click for Info IMAGE:938231 [ENSG00000197462] Homo sapiens 8,347 uncertain 0.697 0.235
Click to View Chart Preview Click for Info NHX4 [AT5G55470] Arabidopsis thaliana 10,749 uncertain 0.251 2.274
Click to View Chart Preview Click for Info SLC9A6 [ENSG00000198689] Homo sapiens 11,043 uncertain 0.394 2.15
Click to View Chart Preview Click for Info NHX6 [AT1G79610] Arabidopsis thaliana 11,518 uncertain 1.276 0.4
Click to View Chart Preview Click for Info NHX2 [AT3G05030] Arabidopsis thaliana 14,221 uncertain 0.774 1.693
Click to View Chart Preview Click for Info NHX7 [AT2G01980] Arabidopsis thaliana 15,261 uncertain 0.728 2.462
Click to View Chart Preview Click for Info NHX3 [AT3G06370] Arabidopsis thaliana 17,131 uncertain 1.768 1.384
Click to View Chart Preview Click for Info NHX1 [AT5G27150] Arabidopsis thaliana 18,543 uncertain 1.474 2.519
Click to View Chart Preview Click for Info NHX5 [AT1G54370] Arabidopsis thaliana 20,205 uncertain 2.502 2.165

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of SPAC15A10.06 (from probeset SPAC15A10.06).

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