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Homo sapiens

Cyclebase periodic rank: 5,913



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 1.7755
P(reg)
= 0.0187
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info rho4 [SPAC16A10.04] Schizosaccharomyces pombe 64 M 4.41E-36 5.54E-15
Periodic
Click to View Chart Preview Click for Info RHO3 [YIL118W] Saccharomyces cerevisiae 857 uncertain 6.29E-6 0.015
Click to View Chart Preview Click for Info RHO5 [YNL180C] Saccharomyces cerevisiae 945 uncertain 2.11E-6 0.042
Click to View Chart Preview Click for Info cdc42 [SPAC110.03] Schizosaccharomyces pombe 1,002 uncertain 4.02E-13 0.408
Click to View Chart Preview Click for Info TCL [ENSG00000126785] Homo sapiens 1,020 uncertain 0.007 0.003
Click to View Chart Preview Click for Info rho5 [SPAC20H4.11c] Schizosaccharomyces pombe 1,068 uncertain 7.88E-7 0.005
Click to View Chart Preview Click for Info rho3 [SPAC23C4.08] Schizosaccharomyces pombe 1,187 uncertain 2E-10 0.204
Click to View Chart Preview Click for Info RHO1 [YPR165W] Saccharomyces cerevisiae 1,669 uncertain 1.01E-4 0.455
Click to View Chart Preview Click for Info ARAC11 [AT3G51300] Arabidopsis thaliana 1,872 uncertain 0.012 1.889
Click to View Chart Preview Click for Info CDC42 [YLR229C] Saccharomyces cerevisiae 2,221 uncertain 0.003 0.443
Click to View Chart Preview Click for Info rho1 [SPAC1F7.04] Schizosaccharomyces pombe 2,702 uncertain 0.001 1.449
Click to View Chart Preview Click for Info RHO4 [YKR055W] Saccharomyces cerevisiae 2,714 uncertain 0.936 0.01
Click to View Chart Preview Click for Info RHO2 [YNL090W] Saccharomyces cerevisiae 2,927 uncertain 0.02 0.96
Click to View Chart Preview Click for Info ARAC4 [AT1G20090] Arabidopsis thaliana 3,170 uncertain 0.061 0.911
Click to View Chart Preview Click for Info rho2 [SPAC16.01] Schizosaccharomyces pombe 3,995 uncertain 7.28 19.567
Click to View Chart Preview Click for Info RHOBTB2 [ENSG00000008853] Homo sapiens 4,592 uncertain 2.702 0.004
Click to View Chart Preview Click for Info RHOU [ENSG00000116574] Homo sapiens 4,790 uncertain 0.314 0.046
Click to View Chart Preview Click for Info RHOC [ENSG00000155366] Homo sapiens 6,443 uncertain 0.617 0.077
Click to View Chart Preview Click for Info ARAC2 [AT5G45970] Arabidopsis thaliana 7,949 uncertain 0.926 0.191
Click to View Chart Preview Click for Info ARAC7 [AT4G28950] Arabidopsis thaliana 9,590 uncertain 2.916 0.034
Click to View Chart Preview Click for Info RAC3 [ENSG00000169750] Homo sapiens 9,988 uncertain 0.472 0.915
Click to View Chart Preview Click for Info RHOBTB1 [ENSG00000072422] Homo sapiens 10,680 uncertain 1.123 0.594
Click to View Chart Preview Click for Info RAC1 [ENSG00000136238] Homo sapiens 10,755 uncertain 0.525 1.322
Click to View Chart Preview Click for Info IMAGE:877782 [ENSG00000172895] Homo sapiens 10,756 uncertain 0.525 1.322
Click to View Chart Preview Click for Info RHOH [ENSG00000168421] Homo sapiens 10,760 uncertain 1.721 0.405
Click to View Chart Preview Click for Info ARAC9 [AT2G44690] Arabidopsis thaliana 10,991 uncertain 0.957 0.483
Click to View Chart Preview Click for Info ARAC1 [AT2G17800] Arabidopsis thaliana 11,018 uncertain 0.248 2.511
Click to View Chart Preview Click for Info ARAC8 [AT3G48040] Arabidopsis thaliana 11,671 uncertain 1.799 0.272
Click to View Chart Preview Click for Info RND2 [ENSG00000108830] Homo sapiens 12,006 uncertain 2.212 0.713
Click to View Chart Preview Click for Info RHOQ [ENSG00000173284] Homo sapiens 12,169 uncertain 0.712 2.467
Click to View Chart Preview Click for Info RAC2 [ENSG00000128340] Homo sapiens 12,302 uncertain 1.085 1.794
Click to View Chart Preview Click for Info RHOA [ENSG00000067560] Homo sapiens 12,422 uncertain 1.128 1.886
Click to View Chart Preview Click for Info ARAC10 [AT5G62880] Arabidopsis thaliana 12,643 uncertain 0.368 2.578
Click to View Chart Preview Click for Info Rho [ENSG00000173156] Homo sapiens 13,786 uncertain 3.17 2.795
Click to View Chart Preview Click for Info RHOG [ENSG00000177105] Homo sapiens 13,923 uncertain 1.389 8.787
Click to View Chart Preview Click for Info ARAC3 [AT4G35020] Arabidopsis thaliana 16,774 uncertain 1.087 2.237

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of RND1 (from probeset IMAGE:51741).

Click to enlarge