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Homo sapiens

Cyclebase periodic rank: 4,748



Gene Features:

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Degradation Signals:
  1. Dbox
  2. KENbox
  3. PEST

Analysis Results

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Warning: multiple probesets target this gene. Displaying analysis results for probeset 'IMAGE:134430'.

Combined Analysis (all experiments)

P(per)
= 0.944
P(reg)
= 0.0147
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info OLR1 [ENSG00000173391] Homo sapiens 118 M 7.17E-6 8.14E-10
Periodic
Click to View Chart Preview Click for Info P105 [ENSG00000142186] Homo sapiens 163 G2 4.97E-8 1.03E-5
Periodic
Click to View Chart Preview Click for Info LTBP3 [ENSG00000168056] Homo sapiens 164 G2 4.97E-8 1.03E-5
Periodic
Click to View Chart Preview Click for Info MATN2 [ENSG00000132561] Homo sapiens 789 uncertain 3.72E-6 1.352
Click to View Chart Preview Click for Info MBL2 [ENSG00000165471] Homo sapiens 929 uncertain 3.05E-5 0.371
Click to View Chart Preview Click for Info C4BPB [ENSG00000123843] Homo sapiens 1,340 uncertain 0.019 0.004
Click to View Chart Preview Click for Info CASIL [ENSG00000074181] Homo sapiens 1,945 uncertain 1.81E-4 2.444
Click to View Chart Preview Click for Info CLEC4A [ENSG00000111729] Homo sapiens 2,051 uncertain 0.166 0.003
Click to View Chart Preview Click for Info REGL [ENSG00000115386] Homo sapiens 2,277 uncertain 3.16E-4 2.666
Click to View Chart Preview Click for Info SCUBE2 [ENSG00000175356] Homo sapiens 2,373 uncertain 0.034 0.031
Click to View Chart Preview Click for Info DNER [ENSG00000187957] Homo sapiens 2,465 uncertain 0.416 0.003
Click to View Chart Preview Click for Info SFTPA2B [ENSG00000122854] Homo sapiens 2,506 uncertain 0.187 0.007
Click to View Chart Preview Click for Info SFTPA2 [ENSG00000182314] Homo sapiens 2,507 uncertain 0.187 0.007
Click to View Chart Preview Click for Info EGFL9 [ENSG00000171462] Homo sapiens 2,529 uncertain 0.046 0.028
Click to View Chart Preview Click for Info CD94 [ENSG00000134539] Homo sapiens 2,583 uncertain 0.083 0.017
Click to View Chart Preview Click for Info KLRK1 [ENSG00000183542] Homo sapiens 3,719 uncertain 0.002 2.488
Click to View Chart Preview Click for Info LTBP4 [ENSG00000090006] Homo sapiens 3,934 uncertain 0.014 0.475
Click to View Chart Preview Click for Info CSMD3 [ENSG00000164796] Homo sapiens 4,174 uncertain 0.339 0.025
Click to View Chart Preview Click for Info FBN [ENSG00000166147] Homo sapiens 4,407 uncertain 0.838 0.012
Click to View Chart Preview Click for Info MATN4 [ENSG00000124159] Homo sapiens 4,600 uncertain 0.006 2.035
Click to View Chart Preview Click for Info SELL [ENSG00000188404] Homo sapiens 4,777 uncertain 0.361 0.039
Click to View Chart Preview Click for Info CLEC5A [ENSG00000090269] Homo sapiens 5,098 uncertain 2.077 0.009
Click to View Chart Preview Click for Info ELTD1 [ENSG00000162618] Homo sapiens 5,156 uncertain 2.575 0.007
Click to View Chart Preview Click for Info LTBP2 [ENSG00000119681] Homo sapiens 5,369 uncertain 0.191 0.116
Click to View Chart Preview Click for Info PLA2R1 [ENSG00000153246] Homo sapiens 5,833 uncertain 0.011 2.849
Click to View Chart Preview Click for Info REG3G [ENSG00000143954] Homo sapiens 5,984 uncertain 0.349 0.1
Click to View Chart Preview Click for Info CLEC3A [ENSG00000166509] Homo sapiens 6,150 uncertain 1.42 0.027
Click to View Chart Preview Click for Info DENND1A [ENSG00000119522] Homo sapiens 6,554 uncertain 0.06 0.852
Click to View Chart Preview Click for Info CRB2 [ENSG00000148204] Homo sapiens 6,555 uncertain 0.06 0.852
Click to View Chart Preview Click for Info POEM [ENSG00000168743] Homo sapiens 7,444 uncertain 0.602 0.152
Click to View Chart Preview Click for Info EFEMP2 [ENSG00000172638] Homo sapiens 7,671 uncertain 1.304 0.082
Click to View Chart Preview Click for Info UND [ENSG00000187955] Homo sapiens 7,681 uncertain 0.019 5.538
Click to View Chart Preview Click for Info MRLP1 [ENSG00000140839] Homo sapiens 8,080 uncertain 0.231 0.6
Click to View Chart Preview Click for Info LTBP1 [ENSG00000049323] Homo sapiens 8,187 uncertain 1.255 0.118
Click to View Chart Preview Click for Info COLEC11 [ENSG00000118004] Homo sapiens 8,605 uncertain 0.312 0.608
Click to View Chart Preview Click for Info ASGR1 [ENSG00000141505] Homo sapiens 8,755 uncertain 0.124 1.689
Click to View Chart Preview Click for Info CLEC1A [ENSG00000150048] Homo sapiens 9,006 uncertain 7.216 0.034
Click to View Chart Preview Click for Info SELE [ENSG00000007908] Homo sapiens 9,011 uncertain 1.198 0.204
Click to View Chart Preview Click for Info KIAA1324L [ENSG00000164659] Homo sapiens 9,121 uncertain 0.187 1.391
Click to View Chart Preview Click for Info EGFL6 [ENSG00000198759] Homo sapiens 9,298 uncertain 0.806 0.357
Click to View Chart Preview Click for Info ASGR2 [ENSG00000161944] Homo sapiens 9,391 uncertain 1.191 0.257
Click to View Chart Preview Click for Info CD69 [ENSG00000110848] Homo sapiens 9,431 uncertain 0.137 2.275
Click to View Chart Preview Click for Info NDUFS5 [ENSG00000168653] Homo sapiens 9,722 uncertain 0.441 0.831
Click to View Chart Preview Click for Info EGFL7 [ENSG00000172889] Homo sapiens 9,723 uncertain 0.441 0.831
Click to View Chart Preview Click for Info F12 [ENSG00000131187] Homo sapiens 9,810 uncertain 0.17 2.27
Click to View Chart Preview Click for Info FBLN [ENSG00000077942] Homo sapiens 9,905 uncertain 0.107 3.819
Click to View Chart Preview Click for Info EDM5 [ENSG00000132031] Homo sapiens 10,170 uncertain 0.232 2.071
Click to View Chart Preview Click for Info TM2D1 [ENSG00000162604] Homo sapiens 10,171 uncertain 0.232 2.071
Click to View Chart Preview Click for Info CRB1 [ENSG00000134376] Homo sapiens 10,386 uncertain 1.965 0.281
Click to View Chart Preview Click for Info FBLN2 [ENSG00000163520] Homo sapiens 10,470 uncertain 0.276 2.116
Click to View Chart Preview Click for Info DLL3 [ENSG00000090932] Homo sapiens 10,716 uncertain 2.505 0.271
Click to View Chart Preview Click for Info REG3A [ENSG00000172016] Homo sapiens 10,922 uncertain 3.108 0.251
Click to View Chart Preview Click for Info UP50 [ENSG00000140092] Homo sapiens 11,167 uncertain 5.211 0.177
Click to View Chart Preview Click for Info MRC1 [ENSG00000120586] Homo sapiens 11,253 uncertain 0.304 3.225
Click to View Chart Preview Click for Info MRC1L1 [ENSG00000183748] Homo sapiens 11,254 uncertain 0.304 3.225
Click to View Chart Preview Click for Info NELL2 [ENSG00000184613] Homo sapiens 11,489 uncertain 2.542 0.447
Click to View Chart Preview Click for Info CL-L1 [ENSG00000184374] Homo sapiens 11,586 uncertain 2.57 0.467
Click to View Chart Preview Click for Info CD209 [ENSG00000090659] Homo sapiens 11,790 uncertain 0.85 1.615
Click to View Chart Preview Click for Info SELP [ENSG00000174175] Homo sapiens 12,119 uncertain 4.92 0.342
Click to View Chart Preview Click for Info MRC2 [ENSG00000011028] Homo sapiens 12,155 uncertain 3.337 0.52
Click to View Chart Preview Click for Info CLEC4M [ENSG00000104938] Homo sapiens 12,269 uncertain 0.955 1.988
Click to View Chart Preview Click for Info HML [ENSG00000132514] Homo sapiens 12,579 uncertain 1.418 1.689
Click to View Chart Preview Click for Info PRG2 [ENSG00000186652] Homo sapiens 12,937 uncertain 2.794 1.2
Click to View Chart Preview Click for Info CD302 [ENSG00000136539] Homo sapiens 13,017 uncertain 5.748 0.628
Click to View Chart Preview Click for Info SEZ6 [ENSG00000063015] Homo sapiens 13,140 uncertain 3.941 1.035
Click to View Chart Preview Click for Info CLEC3B [ENSG00000163815] Homo sapiens 13,174 uncertain 1.471 2.867
Click to View Chart Preview Click for Info COL22A1 [ENSG00000169436] Homo sapiens 13,186 uncertain 2.336 1.831
Click to View Chart Preview Click for Info NELL1 [ENSG00000165973] Homo sapiens 13,366 uncertain 3.473 1.501
Click to View Chart Preview Click for Info FCER2 [ENSG00000104921] Homo sapiens 13,427 uncertain 2.563 2.211
Click to View Chart Preview Click for Info FBLN7 [ENSG00000144152] Homo sapiens 13,448 uncertain 1.805 3.203
Click to View Chart Preview Click for Info MATN1 [ENSG00000162510] Homo sapiens 13,747 uncertain 3.291 2.555
Click to View Chart Preview Click for Info MRLP3 [ENSG00000157335] Homo sapiens 13,835 uncertain 4.017 2.496

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of SVEP1 (from probeset IMAGE:134430).

Click to enlarge