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Homo sapiens

Cyclebase periodic rank: 11,054



Analysis Results

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Warning: The current probeset 'IMAGE:234522' targets multiple genes!

Combined Analysis (all experiments)

P(per)
= 2.9149
P(reg)
= 0.2932
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info KAT3 [AT4G32650] Arabidopsis thaliana 446 uncertain 0.042 0.001
Click to View Chart Preview Click for Info At3g49160 Arabidopsis thaliana 521 uncertain 0.17 9.14E-7
Click to View Chart Preview Click for Info PYK2 [YOR347C] Saccharomyces cerevisiae 540 M/G1 2.23E-7 0.001
Periodic
Click to View Chart Preview Click for Info KAT2 [AT4G18290] Arabidopsis thaliana 1,270 uncertain 0.347 2.96E-5
Click to View Chart Preview Click for Info CNGC20 [AT3G17700] Arabidopsis thaliana 1,922 uncertain 0.235 0.015
Click to View Chart Preview Click for Info GORK [AT5G37500] Arabidopsis thaliana 2,016 uncertain 0.365 0.002
Click to View Chart Preview Click for Info F5D14.22 [AT1G32440] Arabidopsis thaliana 2,733 uncertain 0.08 0.474
Click to View Chart Preview Click for Info CNGC16 [AT3G48010] Arabidopsis thaliana 3,207 uncertain 0.82 0.001
Click to View Chart Preview Click for Info AKT5 [AT4G32500] Arabidopsis thaliana 3,431 uncertain 0.594 0.016
Click to View Chart Preview Click for Info At5g46240 Arabidopsis thaliana 3,529 uncertain 1.622 5.22E-5
Click to View Chart Preview Click for Info CNGC8 [AT1G19780] Arabidopsis thaliana 3,843 uncertain 0.155 0.428
Click to View Chart Preview Click for Info pyk1 [SPAC4H3.10c] Schizosaccharomyces pombe 4,030 uncertain 70.353 0.285
Click to View Chart Preview Click for Info At4g26390 Arabidopsis thaliana 4,241 uncertain 0.142 0.581
Click to View Chart Preview Click for Info KCNH3 [ENSG00000135519] Homo sapiens 4,933 uncertain 2.045 0.008
Click to View Chart Preview Click for Info CDC19 [YAL038W] Saccharomyces cerevisiae 4,991 uncertain 311.7 0.023
Click to View Chart Preview Click for Info At3g25960 Arabidopsis thaliana 5,060 uncertain 0.102 1.209
Click to View Chart Preview Click for Info AKT2 [AT4G22200] Arabidopsis thaliana 5,517 uncertain 1.3 0.013
Click to View Chart Preview Click for Info CNGC19 [AT3G17690] Arabidopsis thaliana 5,562 uncertain 1.731 0.003
Click to View Chart Preview Click for Info At2g36580 Arabidopsis thaliana 6,190 uncertain 0.251 0.592
Click to View Chart Preview Click for Info CNGC9 [AT4G30560] Arabidopsis thaliana 6,946 uncertain 1.824 0.015
Click to View Chart Preview Click for Info AT5g56350 Arabidopsis thaliana 7,717 uncertain 0.204 1.2
Click to View Chart Preview Click for Info DND1 [AT5G15410] Arabidopsis thaliana 8,828 uncertain 1.006 0.225
Click to View Chart Preview Click for Info At5g63680 Arabidopsis thaliana 9,896 uncertain 0.183 2.545
Click to View Chart Preview Click for Info KCNH8 [ENSG00000183960] Homo sapiens 9,900 uncertain 2.484 0.164
Click to View Chart Preview Click for Info CNGC15 [AT2G28260] Arabidopsis thaliana 10,138 uncertain 1.746 0.161
Click to View Chart Preview Click for Info CNGC7 [AT1G15990] Arabidopsis thaliana 10,538 uncertain 3.05 0.067
Click to View Chart Preview Click for Info HCN2 [ENSG00000099822] Homo sapiens 10,573 uncertain 0.298 2.11
Click to View Chart Preview Click for Info CNGC12 [AT2G46450] Arabidopsis thaliana 10,623 uncertain 0.344 1.505
Click to View Chart Preview Click for Info AKT6 [AT2G25600] Arabidopsis thaliana 10,660 uncertain 2.786 0.089
Click to View Chart Preview Click for Info SKOR [AT3G02850] Arabidopsis thaliana 10,897 uncertain 3 0.086
Click to View Chart Preview Click for Info CNGC10 [AT1G01340] Arabidopsis thaliana 10,946 uncertain 2.808 0.101
Click to View Chart Preview Click for Info PKLR [ENSG00000143627] Homo sapiens 11,053 uncertain 2.915 0.293
Click to View Chart Preview Click for Info CNGC18 [AT5G14870] Arabidopsis thaliana 11,351 uncertain 0.276 2.45
Click to View Chart Preview Click for Info CNGC14 [AT2G24610] Arabidopsis thaliana 12,149 uncertain 0.944 0.712
Click to View Chart Preview Click for Info At3g04050 Arabidopsis thaliana 12,433 uncertain 2.458 0.232
Click to View Chart Preview Click for Info At5g08570 Arabidopsis thaliana 12,606 uncertain 0.421 2.174
Click to View Chart Preview Click for Info CNGC6 [AT2G23980] Arabidopsis thaliana 12,701 uncertain 0.752 1.111
Click to View Chart Preview Click for Info KCNH7 [ENSG00000184611] Homo sapiens 13,778 uncertain 1.617 5.421
Click to View Chart Preview Click for Info CNGC4 [AT5G54250] Arabidopsis thaliana 13,829 uncertain 2.232 0.417
Click to View Chart Preview Click for Info CNGC5 [AT5G57940] Arabidopsis thaliana 14,421 uncertain 0.74 1.889
Click to View Chart Preview Click for Info At5g52920 Arabidopsis thaliana 15,790 uncertain 1.585 1.111
Click to View Chart Preview Click for Info CNGC13 [AT4G01010] Arabidopsis thaliana 16,474 uncertain 2.167 0.907
Click to View Chart Preview Click for Info CNGC17 [AT4G30360] Arabidopsis thaliana 17,382 uncertain 1.266 2.218
Click to View Chart Preview Click for Info At3g22960 Arabidopsis thaliana 18,428 uncertain 1.502 2.398

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of HCN3 (from probeset IMAGE:234522).

Click to enlarge