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Homo sapiens

Cyclebase periodic rank: 10,179



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 0.1876
P(reg)
= 2.5749
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info HSPA1L [ENSG00000204390] Homo sapiens 85 M 1.1E-9 5.37E-8
Periodic
Click to View Chart Preview Click for Info HSPA2 [ENSG00000126803] Homo sapiens 250 G2 2.19E-7 5.66E-4
Periodic
Click to View Chart Preview Click for Info SSA1 [YAL005C] Saccharomyces cerevisiae 453 uncertain 7.85E-6 9.75E-7
Periodic
Click to View Chart Preview Click for Info SSA2 [YLL024C] Saccharomyces cerevisiae 765 uncertain 0.008 2.36E-6
Click to View Chart Preview Click for Info SSB2 [YNL209W] Saccharomyces cerevisiae 957 uncertain 0.003 0.002
Click to View Chart Preview Click for Info ssa1 [SPAC13G7.02c] Schizosaccharomyces pombe 1,463 uncertain 0.684 8.92E-10
Click to View Chart Preview Click for Info HSPA1A [ENSG00000206273] Homo sapiens 1,847 uncertain 0.007 0.053
Click to View Chart Preview Click for Info HSPA1A [ENSG00000206382] Homo sapiens 1,848 uncertain 0.007 0.053
Click to View Chart Preview Click for Info ssa2 [SPCC1739.13] Schizosaccharomyces pombe 1,969 uncertain 30.459 1.7E-11
Click to View Chart Preview Click for Info sks2 [SPBC1709.05] Schizosaccharomyces pombe 2,323 uncertain 0.004 0.214
Click to View Chart Preview Click for Info HSC70-1 [AT5G02500] Arabidopsis thaliana 2,723 uncertain 0.027 1.727
Click to View Chart Preview Click for Info SSA3 [YBL075C] Saccharomyces cerevisiae 3,245 uncertain 1.121 0.047
Click to View Chart Preview Click for Info SSA4 [YER103W] Saccharomyces cerevisiae 3,985 uncertain 318.2 0.001
Click to View Chart Preview Click for Info At2g32120 Arabidopsis thaliana 4,059 uncertain 0.115 0.697
Click to View Chart Preview Click for Info STCH [ENSG00000155304] Homo sapiens 4,078 uncertain 0.005 1.502
Click to View Chart Preview Click for Info SPAC57A7.12 Schizosaccharomyces pombe 4,206 uncertain 237.743 0.18
Click to View Chart Preview Click for Info SSB1 [YDL229W] Saccharomyces cerevisiae 4,718 uncertain 174.2 0.019
Click to View Chart Preview Click for Info hsp70 [AT3G12580] Arabidopsis thaliana 4,991 uncertain 0.907 0.037
Click to View Chart Preview Click for Info SSZ1 [YHR064C] Saccharomyces cerevisiae 5,283 uncertain 12.79 1.374
Click to View Chart Preview Click for Info HSPA6 [ENSG00000173110] Homo sapiens 6,632 uncertain 0.131 0.413
Click to View Chart Preview Click for Info PIR1 [ENSG00000144048] Homo sapiens 7,251 uncertain 0.185 0.432
Click to View Chart Preview Click for Info HSPA1B [ENSG00000204388] Homo sapiens 7,252 uncertain 0.185 0.432
Click to View Chart Preview Click for Info HSPA12A [ENSG00000165868] Homo sapiens 8,201 uncertain 0.023 6.608
Click to View Chart Preview Click for Info HSC70-2 [AT5G02490] Arabidopsis thaliana 8,881 uncertain 0.972 0.24
Click to View Chart Preview Click for Info At1g56410 Arabidopsis thaliana 9,129 uncertain 2.251 0.058
Click to View Chart Preview Click for Info HSC70-3 [AT3G09440] Arabidopsis thaliana 11,950 uncertain 2.659 0.174
Click to View Chart Preview Click for Info At1g16030 Arabidopsis thaliana 20,506 uncertain 2.579 2.347

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of HSPA12B (from probeset IMAGE:80306).

Click to enlarge