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Homo sapiens

Cyclebase periodic rank: 2,066



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 0.344
P(reg)
= 0.0016
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info GNB1 [ENSG00000078369] Homo sapiens 615 uncertain 5.9E-7 1.155
Click to View Chart Preview Click for Info STE4 [YOR212W] Saccharomyces cerevisiae 3,934 uncertain 0.38 0.968
Click to View Chart Preview Click for Info git5 [SPBC32H8.07] Schizosaccharomyces pombe 4,663 uncertain 123714.254 5.06E-5
Click to View Chart Preview Click for Info GB5 [ENSG00000069966] Homo sapiens 5,058 uncertain 0.629 0.028
Click to View Chart Preview Click for Info GNB2 [ENSG00000172354] Homo sapiens 10,192 uncertain 0.067 7.311
Click to View Chart Preview Click for Info GB1 [AT4G34460] Arabidopsis thaliana 20,845 uncertain 2.783 2.56

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of GNB4 (from probeset IMAGE:149547).

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