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Homo sapiens

Cyclebase periodic rank: 11,721



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 0.2334
P(reg)
= 5.6571
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info DBF2 [YGR092W] Saccharomyces cerevisiae 72 M 2.69E-19 1.21E-7
Periodic
Click to View Chart Preview Click for Info sid2 [SPAC24B11.11c] Schizosaccharomyces pombe 83 M 1.16E-34 4.78E-11
Periodic
Click to View Chart Preview Click for Info RIM15 [YFL033C] Saccharomyces cerevisiae 1,668 uncertain 0.091 0.002
Click to View Chart Preview Click for Info DBF20 [YPR111W] Saccharomyces cerevisiae 1,923 uncertain 1.36E-4 0.998
Click to View Chart Preview Click for Info ppk18 [SPAPB18E9.02c] Schizosaccharomyces pombe 2,500 uncertain 0.219 0.034
Click to View Chart Preview Click for Info ppk31 [SPBC725.06c] Schizosaccharomyces pombe 2,594 uncertain 6.397 4.68E-6
Click to View Chart Preview Click for Info orb6 [SPAC821.12] Schizosaccharomyces pombe 3,476 uncertain 3.643 0.703
Click to View Chart Preview Click for Info ppk35 [SPCC417.06c] Schizosaccharomyces pombe 4,541 uncertain 26431.346 1.63E-4
Click to View Chart Preview Click for Info cek1 [SPCC1450.11c] Schizosaccharomyces pombe 4,922 uncertain 4120219.233 0.003
Click to View Chart Preview Click for Info CBK1 [YNL161W] Saccharomyces cerevisiae 5,037 uncertain 3.129 2.599
Click to View Chart Preview Click for Info STK38L [ENSG00000211455] Homo sapiens 7,739 uncertain 3.106 0.036
Click to View Chart Preview Click for Info At2g20470 Arabidopsis thaliana 10,732 uncertain 1.95 0.172
Click to View Chart Preview Click for Info MAST1 [ENSG00000105613] Homo sapiens 11,504 uncertain 0.42 2.725
Click to View Chart Preview Click for Info dl3215c [AT4G14350] Arabidopsis thaliana 12,082 uncertain 0.52 1.436
Click to View Chart Preview Click for Info At3g23310 Arabidopsis thaliana 13,235 uncertain 0.427 2.562
Click to View Chart Preview Click for Info T5I8.9 [AT1G30640] Arabidopsis thaliana 14,524 uncertain 1.111 1.189
Click to View Chart Preview Click for Info F21M11.15 [AT1G03920] Arabidopsis thaliana 16,638 uncertain 1.96 1.064
Click to View Chart Preview Click for Info F4I10.10 [AT4G33080] Arabidopsis thaliana 18,023 uncertain 1.412 2.319
Click to View Chart Preview Click for Info At2g19400 Arabidopsis thaliana 19,142 uncertain 2.412 1.625
Click to View Chart Preview Click for Info AtNdr1 [AT5G09890] Arabidopsis thaliana 20,702 uncertain 2.619 2.538

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of STK38 (from probeset IMAGE:826135).

Click to enlarge