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Homo sapiens

Cyclebase periodic rank: 2,051



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 0.1656
P(reg)
= 0.0033
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info OLR1 [ENSG00000173391] Homo sapiens 118 M 7.17E-6 8.14E-10
Periodic
Click to View Chart Preview Click for Info MBL2 [ENSG00000165471] Homo sapiens 929 uncertain 3.05E-5 0.371
Click to View Chart Preview Click for Info C4BPB [ENSG00000123843] Homo sapiens 1,340 uncertain 0.019 0.004
Click to View Chart Preview Click for Info REGL [ENSG00000115386] Homo sapiens 2,277 uncertain 3.16E-4 2.666
Click to View Chart Preview Click for Info SFTPA2B [ENSG00000122854] Homo sapiens 2,506 uncertain 0.187 0.007
Click to View Chart Preview Click for Info SFTPA2 [ENSG00000182314] Homo sapiens 2,507 uncertain 0.187 0.007
Click to View Chart Preview Click for Info CD94 [ENSG00000134539] Homo sapiens 2,583 uncertain 0.083 0.017
Click to View Chart Preview Click for Info KLRK1 [ENSG00000183542] Homo sapiens 3,719 uncertain 0.002 2.488
Click to View Chart Preview Click for Info CSMD3 [ENSG00000164796] Homo sapiens 4,174 uncertain 0.339 0.025
Click to View Chart Preview Click for Info SVEP1 [ENSG00000165124] Homo sapiens 4,748 uncertain 0.944 0.015
Click to View Chart Preview Click for Info SELL [ENSG00000188404] Homo sapiens 4,777 uncertain 0.361 0.039
Click to View Chart Preview Click for Info CLEC5A [ENSG00000090269] Homo sapiens 5,098 uncertain 2.077 0.009
Click to View Chart Preview Click for Info PLA2R1 [ENSG00000153246] Homo sapiens 5,833 uncertain 0.011 2.849
Click to View Chart Preview Click for Info REG3G [ENSG00000143954] Homo sapiens 5,984 uncertain 0.349 0.1
Click to View Chart Preview Click for Info CLEC3A [ENSG00000166509] Homo sapiens 6,150 uncertain 1.42 0.027
Click to View Chart Preview Click for Info MRLP1 [ENSG00000140839] Homo sapiens 8,080 uncertain 0.231 0.6
Click to View Chart Preview Click for Info COLEC11 [ENSG00000118004] Homo sapiens 8,605 uncertain 0.312 0.608
Click to View Chart Preview Click for Info ASGR1 [ENSG00000141505] Homo sapiens 8,755 uncertain 0.124 1.689
Click to View Chart Preview Click for Info CLEC1A [ENSG00000150048] Homo sapiens 9,006 uncertain 7.216 0.034
Click to View Chart Preview Click for Info SELE [ENSG00000007908] Homo sapiens 9,011 uncertain 1.198 0.204
Click to View Chart Preview Click for Info ASGR2 [ENSG00000161944] Homo sapiens 9,391 uncertain 1.191 0.257
Click to View Chart Preview Click for Info CD69 [ENSG00000110848] Homo sapiens 9,431 uncertain 0.137 2.275
Click to View Chart Preview Click for Info REG3A [ENSG00000172016] Homo sapiens 10,922 uncertain 3.108 0.251
Click to View Chart Preview Click for Info MRC1 [ENSG00000120586] Homo sapiens 11,253 uncertain 0.304 3.225
Click to View Chart Preview Click for Info MRC1L1 [ENSG00000183748] Homo sapiens 11,254 uncertain 0.304 3.225
Click to View Chart Preview Click for Info CL-L1 [ENSG00000184374] Homo sapiens 11,586 uncertain 2.57 0.467
Click to View Chart Preview Click for Info CD209 [ENSG00000090659] Homo sapiens 11,790 uncertain 0.85 1.615
Click to View Chart Preview Click for Info SELP [ENSG00000174175] Homo sapiens 12,119 uncertain 4.92 0.342
Click to View Chart Preview Click for Info MRC2 [ENSG00000011028] Homo sapiens 12,155 uncertain 3.337 0.52
Click to View Chart Preview Click for Info CLEC4M [ENSG00000104938] Homo sapiens 12,269 uncertain 0.955 1.988
Click to View Chart Preview Click for Info HML [ENSG00000132514] Homo sapiens 12,579 uncertain 1.418 1.689
Click to View Chart Preview Click for Info PRG2 [ENSG00000186652] Homo sapiens 12,937 uncertain 2.794 1.2
Click to View Chart Preview Click for Info CD302 [ENSG00000136539] Homo sapiens 13,017 uncertain 5.748 0.628
Click to View Chart Preview Click for Info SEZ6 [ENSG00000063015] Homo sapiens 13,140 uncertain 3.941 1.035
Click to View Chart Preview Click for Info CLEC3B [ENSG00000163815] Homo sapiens 13,174 uncertain 1.471 2.867
Click to View Chart Preview Click for Info FCER2 [ENSG00000104921] Homo sapiens 13,427 uncertain 2.563 2.211
Click to View Chart Preview Click for Info MRLP3 [ENSG00000157335] Homo sapiens 13,835 uncertain 4.017 2.496

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of CLEC4A (from probeset IMAGE:454296).

Click to enlarge