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Homo sapiens

Cyclebase periodic rank: 12,535



Analysis Results

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Combined Analysis (all experiments)

P(per)
= 0.9511
P(reg)
= 2.4318
Peaktime
uncertain [see possible reasons why]

Combined Peaktime

Peaktime Chart
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Experiments


Orthologs and Paralogs:

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Gene Name Organism Rank Sort Direction Rank Peaktime P(per) P(reg)
Click to View Chart Preview Click for Info UBE2D3 [ENSG00000109332] Homo sapiens 355 M/G1 1.17E-8 0.783
Periodic
Click to View Chart Preview Click for Info UBC30 [AT5G56150] Arabidopsis thaliana 801 uncertain 3.13E-4 2.472
Click to View Chart Preview Click for Info UBC4 [YBR082C] Saccharomyces cerevisiae 1,839 uncertain 0.025 0.015
Click to View Chart Preview Click for Info UBE2E1 [ENSG00000170142] Homo sapiens 2,170 uncertain 0.001 0.659
Click to View Chart Preview Click for Info UBC13 [YDR092W] Saccharomyces cerevisiae 2,542 uncertain 0.014 0.36
Click to View Chart Preview Click for Info ubc16 [SPBC1198.09] Schizosaccharomyces pombe 2,757 uncertain 0.004 1.222
Click to View Chart Preview Click for Info ubc14 [SPAC1250.03] Schizosaccharomyces pombe 2,931 uncertain 0.388 0.427
Click to View Chart Preview Click for Info ubc13 [SPAC11E3.04c] Schizosaccharomyces pombe 3,232 uncertain 0.012 5.142
Click to View Chart Preview Click for Info ubc4 [SPBC119.02] Schizosaccharomyces pombe 3,368 uncertain 1.85 1.016
Click to View Chart Preview Click for Info At2g32790 Arabidopsis thaliana 3,684 uncertain 0.74 0.009
Click to View Chart Preview Click for Info PEX4 [YGR133W] Saccharomyces cerevisiae 4,971 uncertain 3.669 1.805
Click to View Chart Preview Click for Info UBC5 [YDR059C] Saccharomyces cerevisiae 5,349 uncertain 31.28 0.669
Click to View Chart Preview Click for Info UBC28 [AT1G64230] Arabidopsis thaliana 11,602 uncertain 0.529 1.209
Click to View Chart Preview Click for Info UBC12 [AT3G08700] Arabidopsis thaliana 11,672 uncertain 0.477 1.405
Click to View Chart Preview Click for Info UBE2E2 [ENSG00000182247] Homo sapiens 11,673 uncertain 0.497 2.576
Click to View Chart Preview Click for Info UBE2D4 [ENSG00000078967] Homo sapiens 12,592 uncertain 1.689 1.428
Click to View Chart Preview Click for Info UBE2N [ENSG00000177889] Homo sapiens 13,397 uncertain 1.445 3.752
Click to View Chart Preview Click for Info UbcM2 [ENSG00000170035] Homo sapiens 13,849 uncertain 1.777 5.746
Click to View Chart Preview Click for Info UBC35 [AT1G78870] Arabidopsis thaliana 14,159 uncertain 0.594 2.284
Click to View Chart Preview Click for Info COP10 [AT3G13550] Arabidopsis thaliana 14,922 uncertain 1.399 1.016
Click to View Chart Preview Click for Info UBC8 [AT5G41700] Arabidopsis thaliana 14,988 uncertain 1.666 0.838
Click to View Chart Preview Click for Info UBC29 [AT2G16740] Arabidopsis thaliana 16,551 uncertain 0.972 2.427
Click to View Chart Preview Click for Info UBC9 [AT4G27960] Arabidopsis thaliana 16,588 uncertain 0.932 2.576
Click to View Chart Preview Click for Info UBC21 [AT5G25760] Arabidopsis thaliana 16,646 uncertain 1.015 2.354
Click to View Chart Preview Click for Info UBC31 [AT1G36340] Arabidopsis thaliana 18,262 uncertain 3.031 0.985
Click to View Chart Preview Click for Info UBC11 [AT3G08690] Arabidopsis thaliana 19,909 uncertain 2.585 1.879
Click to View Chart Preview Click for Info UBC37 [AT3G24515] Arabidopsis thaliana 19,998 uncertain 2.105 2.459

Short Method Description

Rank Information

The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).

P(per) Information

The P-value for periodicity is the chance of observing as great a periodicity by random shuffling of the individual time-point values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.

P(reg) Information

The P-value for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.

Peaktime Information

The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.

Predicted Periodic

This gene is predicted periodic based on its rank.

Several reasons exist for why peaktime could be uncertain.

Several reasons exist for why peaktime could be uncertain.

Click for more information

Graph of UBE2D1 (from probeset IMAGE:589617).

Click to enlarge