Combined Analysis (all experiments)
 P(per)
 = 0.6935
 P(reg)
 = 1.6208
 Peaktime
 uncertain [see possible reasons why]
Gene Name  Organism  Rank  Peaktime  P(per)  P(reg)  
At1g67180  Arabidopsis thaliana  200  S  0.003  0.057 
Periodic


RTT107 [YHR154W]  Saccharomyces cerevisiae  234  G1/S  1.83E14  1.32E4 
Periodic


SPACUNK4.14  Schizosaccharomyces pombe  342  G2  4.05E15  1.85E4 
Periodic


MDC1 [ENSG00000137337]  Homo sapiens  455  G2  4.06E7  0.188 
Periodic


MDC1 [ENSG00000206385]  Homo sapiens  456  G2  4.06E7  0.188 
Periodic


MDC1 [ENSG00000206481]  Homo sapiens  457  G2  4.06E7  0.188 
Periodic


brc1 [SPBC582.05c]  Schizosaccharomyces pombe  4,464  uncertain  1142.306  0.361  
At2g41450  Arabidopsis thaliana  12,560  uncertain  1.084  0.684  
The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).
The Pvalue for periodicity is the chance of observing as great a periodicity by random shuffling of the individual timepoint values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.
The Pvalue for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.
The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.
This gene is predicted periodic based on its rank.
Several reasons exist for why peaktime could be uncertain.
Several reasons exist for why peaktime could be uncertain.
Graph of At3g21480 (from probeset AT3G21480).