Gene Name  Organism  Rank  Peaktime  P(per)  P(reg)  
At1g18250  Arabidopsis thaliana  1  G1  5E5  4.33E5 
Periodic


H2AV [AT3G54560]  Arabidopsis thaliana  2  S  3.1E5  4.14E4 
Periodic


AT4g21820  Arabidopsis thaliana  3  M/G1  7.4E5  9.89E5 
Periodic


AT5g23420  Arabidopsis thaliana  4  S  3.4E5  6.28E4 
Periodic


At4g28430  Arabidopsis thaliana  5  M/G1  1.64E4  3.32E5 
Periodic


MJM20.1 [AT3G12870]  Arabidopsis thaliana  6  M/G1  4.89E4  7.21E6 
Periodic


F9D16.270 [AT4G23800]  Arabidopsis thaliana  7  G1  3.87E4  3.17E5 
Periodic


CSLD5 [AT1G02730]  Arabidopsis thaliana  8  G1  7.8E4  9.36E6 
Periodic


At5g59870  Arabidopsis thaliana  9  S  9.9E5  7.53E4 
Periodic


BCAT6 [AT1G50110]  Arabidopsis thaliana  10  G1  2.14E4  1.96E4 
Periodic


AT4g05190  Arabidopsis thaliana  11  G1  4.52E4  4.88E5 
Periodic


At5g61000  Arabidopsis thaliana  12  S  5.9E5  0.003 
Periodic


At4g27230  Arabidopsis thaliana  13  S  3.1E5  0.019 
Periodic


At2g38160  Arabidopsis thaliana  14  M/G1  3.53E4  1.99E4 
Periodic


CYCB14 [AT2G26760]  Arabidopsis thaliana  15  G1  0.001  2.05E5 
Periodic


At2g38810  Arabidopsis thaliana  16  S  1.89E4  0.001 
Periodic


dl3485w [AT4G14890]  Arabidopsis thaliana  17  M  1.2E5  0.089 
Periodic


At5g55520  Arabidopsis thaliana  18  G1  0.002  9.5E6 
Periodic


F21M11.4 [AT1G04020]  Arabidopsis thaliana  19  S  1.86E4  0.002 
Periodic


T21H19_170 [AT5G16250]  Arabidopsis thaliana  20  G1  0.001  6.65E5 
Periodic


PSBQ2 [AT4G05180]  Arabidopsis thaliana  21  M/G1  8.08E4  1.08E4 
Periodic


ORC6 [AT1G26840]  Arabidopsis thaliana  22  S  0.001  7.42E5 
Periodic


AT4g02800  Arabidopsis thaliana  23  G1  0.001  5.14E5 
Periodic


At2g43570  Arabidopsis thaliana  24  S  3.53E4  7.28E4 
Periodic


F14P22.240 [AT3G58650]  Arabidopsis thaliana  25  M/G1  0.003  9.73E6 
Periodic


The rank orders each gene of an organism by a score we have assigned based on its pattern of expression and magnitude of regulation. Those genes with the highest periodicity and that are most regulated are given the best ranks (lowest number).
The Pvalue for periodicity is the chance of observing as great a periodicity by random shuffling of the individual timepoint values of the expression profile. A small P(per) value therefore implies a highly periodic pattern of expression.
The Pvalue for regulation estimates the chance that the magnitude of regulation will have occurred at random. A small P(reg) value therefore implies a strongly regulated gene.
The peaktime describes when in the cell cycle a gene is maximally expressed. Peaktime is calculated as a percent, with both 0 and 100 representing the M/G1 transition in the cell cycle. These percents are displayed as discrete phases or transitions of the cell cycle.
This gene is predicted periodic based on its rank.
The Expect (E) Value describes the number of genes one can expect to see by change when searching for a sequence of a particular size. A small Evalue therefore implies a significant match. In Cyclebase, this value is calculated by either BLASTP or BLASTX (mouseover each value to see which).
The Expect (E) Value describes the number of genes one can expect to see by change when searching for a sequence of a particular size. A small Evalue therefore implies a significant match. In Cyclebase, this value is calculated by either BLASTP or BLASTX (mouseover each value to see which).
Evalue calculated by BLASTP
Evalue calculated by BLASTX